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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3341621_3341736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3341621 - 3341736

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

TCTGTCTCCACA

Flanking Amino Acid:

LDLFPVELEKDSEGLGISII

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

-0.2

1.4

53.5

Major PPT

78.2

0.64

0.8

72.3

32.5

Minor 5ss

-2.3

3.1

41.6

Minor BPS

47.6

-0.1

2.1

62.43

44.3

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013739

3182176 - 3345377

163202

ENSAPLT00000039552

3182931 - 3345377

162447

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965