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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3341870_3344306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3341870 - 3344306

Intron Length:

2437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCACGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

CCCCTCTCCATG

Flanking Amino Acid:

KIQFSTAPIQVFSTYSNEDY

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

64.7

0.37

1.3

74.7

Major PPT

62.6

0.28

54.7

35.1

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

39.7

-0.9

1.8

35.48

40.6

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039552

3182931 - 3345377

162447

ENSAPLT00000013739

3182176 - 3345377

163202

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965