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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3347983_3348418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3347983 - 3348418

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAG

U12 Branch Point Sequence:

CCGGTTCCAGCC

Flanking Amino Acid:

ARAAAGLGAGSPGPGGAPGP

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.9

82.7

29.3

Major BPS

44.3

-0.3

1.8

58.2

48.3

Major PPT

64.1

0.32

57.1

38.7

Minor 5ss

17.3

-3.8

3.5

25.7

Minor BPS

34.3

-1.2

1.7

33.64

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025330

3347351 - 3350713

3363