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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3349107_3349235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3349107 - 3349235

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAT

U12 Branch Point Sequence:

GCATCCTCGAGG

Flanking Amino Acid:

RPPRWARTSSRCWRTTGSPT

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

59.9

0.25

1.5

71.4

45.1

Major PPT

79.1

0.65

0.7

72.8

25.4

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

46.4

-0.4

1.9

48.29

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025330

3347351 - 3350713

3363