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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3355097_3355189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3355097 - 3355189

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGATGAT

U12 Branch Point Sequence:

CGGTGCCTAACG

Flanking Amino Acid:

FGETMSDGFQFEYGGEGSNP

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

51.7

0.04

1.4

45.5

47.5

Major PPT

73.8

0.53

0.9

30.9

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

46.7

-0.3

2.2

52.54

47.7

Associated Gene:

Gene:

COL1A1

Ensembl Gene ID:

ENSAPLG00000024223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025182

3354613 - 3358407

3795