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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3355381_3356007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3355381 - 3356007

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTCAGTGTC

5'SS Class:

major

3'SS Sequence:

CCCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

ACCCCCTGACCC

Flanking Amino Acid:

LKMCHGDWKSGEYWIDPNQG

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

71.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

74.5

0.55

0.7

68.7

Minor 5ss

33.1

-1.9

3.2

45.3

42.7

Minor BPS

-0.1

1.8

54.95

Associated Gene:

Gene:

COL1A1

Ensembl Gene ID:

ENSAPLG00000024223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025182

3354613 - 3358407

3795