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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3356868_3357942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3356868 - 3357942

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CCTCCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

CCTCCTCCAACA

Flanking Amino Acid:

RGFPGLPGPSGPQGPRGDKG

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

70.8

0.47

0.8

65.5

28.9

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

46.7

-0.2

1.9

57.53

Associated Gene:

Gene:

COL1A1

Ensembl Gene ID:

ENSAPLG00000024223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025182

3354613 - 3358407

3795