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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3358071_3358148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3358071 - 3358148

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGCGTCA

5'SS Class:

major

3'SS Sequence:

CCACCCCCCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

GTGACGGCCACT

Flanking Amino Acid:

PSDVTPSRIPGAVCPPQGAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

58.8

40.3

Major BPS

52.4

0.06

1.3

41.7

Major PPT

47.6

-0.1

1.6

30.7

Minor 5ss

30.8

-2.2

4.3

47.4

48.2

Minor BPS

33.4

-1.2

2.7

53.32

47.4

Associated Gene:

Gene:

COL1A1

Ensembl Gene ID:

ENSAPLG00000024223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025182

3354613 - 3358407

3795