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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3386154_3386369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3386154 - 3386369

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCG

5'SS Class:

major

3'SS Sequence:

GCGCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAGCAT

U12 Branch Point Sequence:

GCGTTGGGGACA

Flanking Amino Acid:

KDPTYEERHPGRSCMTILTM

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

57.9

46.7

Major BPS

46.8

-0.2

1.4

53.7

41.6

Major PPT

65.1

0.34

0.9

57.4

33.2

Minor 5ss

29.7

-2.3

3.4

38.8

46.5

Minor BPS

35.2

-1.1

2.4

42.35

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027258

3385730 - 3390679

4950

ENSAPLT00000027114

3385730 - 3390212

4483