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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3386480_3386563_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3386480 - 3386563

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

GCCGTGCCCGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCACAC

U12 Branch Point Sequence:

GGTGCCACACGC

Flanking Amino Acid:

WIYPHNDLDTMMTRYAALHR

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

71.2

34.2

Major BPS

-0.3

1.1

48.6

36.6

Major PPT

57.5

0.17

0.9

50.1

34.2

Minor 5ss

32.9

-1.9

3.6

46.8

42.1

Minor BPS

36.8

-1

2.1

45.02

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027258

3385730 - 3390679

4950

ENSAPLT00000027114

3385730 - 3390212

4483