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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3387307_3387398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3387307 - 3387398

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CCCCCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAGCAC

U12 Branch Point Sequence:

GTGTCCGTGTGT

Flanking Amino Acid:

YQRGACGTAVGVAVQKGPSE

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

42.9

-0.4

1.3

45.4

37.1

Major PPT

62.4

0.28

0.9

57.2

27.1

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

34.9

-1.1

3.8

63.2

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027258

3385730 - 3390679

4950

ENSAPLT00000027114

3385730 - 3390212

4483