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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3387413_3387529_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3387413 - 3387529

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACCCGCG

5'SS Class:

weak_major

3'SS Sequence:

TCTCGCCCGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAC

U12 Branch Point Sequence:

TCACCCGCATCC

Flanking Amino Acid:

LMVHHYQRGACGTAVGVAVQ

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.3

44.4

43.6

Major BPS

1.2

54.6

40.8

Major PPT

66.2

0.36

58.3

38.4

Minor 5ss

41.3

-1

3.4

53.5

45.7

Minor BPS

41.5

-0.6

2.3

52.94

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027258

3385730 - 3390679

4950

ENSAPLT00000027114

3385730 - 3390212

4483