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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3388509_3389123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3388509 - 3389123

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAG

U12 Branch Point Sequence:

TGTCCCTGCCCA

Flanking Amino Acid:

AIREFMRLSKMASRHVALLA

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

69.4

35.7

Major BPS

38.3

-0.7

1.7

43.9

48.6

Major PPT

69.5

0.44

61.4

Minor 5ss

25.3

-2.8

3.2

32.7

42.3

Minor BPS

38.4

-0.8

3.6

62.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027258

3385730 - 3390679

4950

ENSAPLT00000027114

3385730 - 3390212

4483