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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3392657_3393232_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3392657 - 3393232

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGGGAC

5'SS Class:

major

3'SS Sequence:

CTGCGCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTGAT

U12 Branch Point Sequence:

TGATGGGGAAAC

Flanking Amino Acid:

ESGVATKQLTEADARRTVEE

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

54.8

38.7

Major BPS

57.3

0.18

1.3

48.8

46.3

Major PPT

50.8

0.02

1.1

45.6

41.4

Minor 5ss

23.2

-3.1

3.5

31.3

43.3

Minor BPS

33.1

-1.3

2.6

46.09

42.2

Associated Gene:

Gene:

MPP2

Ensembl Gene ID:

ENSAPLG00000021111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038416

3391480 - 3398727

7248

ENSAPLT00000035968

3391480 - 3397967

6488

ENSAPLT00000031149

3391480 - 3396322

4843