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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3394454_3394736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3394454 - 3394736

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

GTCCCTCGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

GCAGCAGCCACT

Flanking Amino Acid:

RMMYLTTKNAEFDRHELLIY

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.4

37.7

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

61.1

0.25

1.1

57.3

38.6

Minor 5ss

36.1

-1.6

49.4

46.6

Minor BPS

32.8

-1.2

2.4

46.65

44.8

Associated Gene:

Gene:

MPP2

Ensembl Gene ID:

ENSAPLG00000021111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038416

3391480 - 3398727

7248

ENSAPLT00000035968

3391480 - 3397967

6488

ENSAPLT00000031149

3391480 - 3396322

4843