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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3395009_3395422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3395009 - 3395422

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

GGGTCCCCACGT

Flanking Amino Acid:

VNQDDPNWWQACHVEGGSAG

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

71.4

0.48

0.8

62.2

34.7

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

39.3

-0.7

2.2

54.52

46.5

Associated Gene:

Gene:

MPP2

Ensembl Gene ID:

ENSAPLG00000021111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031149

3391480 - 3396322

4843

ENSAPLT00000038416

3391480 - 3398727

7248

ENSAPLT00000035968

3391480 - 3397967

6488