Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3397526_3397601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3397526 - 3397601

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCTAC

5'SS Class:

major

3'SS Sequence:

GCGTGCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCCCCCTGACG

Flanking Amino Acid:

ARILREPHFQSLLETHDSVA

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

67.1

34.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.6

0.51

41.2

Minor 5ss

44.8

-0.6

2.8

57.8

47.2

Minor BPS

47.9

-0.3

1.8

49.82

43.9

Associated Gene:

Gene:

MPP2

Ensembl Gene ID:

ENSAPLG00000021111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038416

3391480 - 3398727

7248

ENSAPLT00000035968

3391480 - 3397967

6488