Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3412028_3413145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3412028 - 3413145

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GTTCTCCCAGGC

Flanking Amino Acid:

PILTQTLTKQDENDDDDDWN

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

79.5

0.66

0.7

72.9

31.9

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

38.1

-0.9

2.1

49.52

40.3

Associated Gene:

Gene:

KPNB1

Ensembl Gene ID:

ENSAPLG00000010177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010681

3400661 - 3421473

20813