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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3416529_3418179_R

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
3416529 - 3418179
Intron Length:
1651

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATT|GTGAGTATG
5'SS Class:
major
3'SS Sequence:
ACACTTCTTCTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AAGTAAT
U12 Branch Point Sequence:
ATTCTATCAACA
Flanking Amino Acid:
EAIGYICQDIDPEQLQDKSN
Intron Amino Acid Position:
193

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
73.4
0.55
1
72.6
38.2
Major BPS
67.8
0.44
1.1
67.7
36.5
Major PPT
71.1
0.47
0.9
62.5
38.9
Minor 5ss
36.5
-1.5
2.9
48.4
41.7
Minor BPS
52.8
0.09
1.8
68.93
36.6

Associated Gene:

Gene:
KPNB1
Ensembl Gene ID:
ENSAPLG00000010177
Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010681
3400661 - 3421473
20813