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Intron Name: Anas_platyrhynchos_platyrhynchos_28_342854_359671_F

Intron Information:

Intron Rank:

137505

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

342854 - 359671

Intron Length:

16818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACCCAGC

5'SS Class:

weak_major

3'SS Sequence:

CTCACTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAC

U12 Branch Point Sequence:

AGCTGCTCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.3

49.1

47.6

Major BPS

59.6

0.24

65.2

28.2

Major PPT

82.5

0.73

0.8

79.9

Minor 5ss

43.8

-0.7

2.9

52.2

44.6

Minor BPS

43.6

-0.4

2.1

58.9

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046871

342709 - 360826

18118