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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3428971_3430787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3428971 - 3430787

Intron Length:

1817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GCTTTTTGTACA

Flanking Amino Acid:

ANDKMAAEVKAFFESHPAPS

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

80.4

0.68

0.9

75.5

38.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

48.5

-0.1

1.8

59.91

40.4

Associated Gene:

Gene:

NPEPPS

Ensembl Gene ID:

ENSAPLG00000009750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010231

3428546 - 3455440

26895