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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3431094_3431354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3431094 - 3431354

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

TTCTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

TTGTCCACATTC

Flanking Amino Acid:

IQKVLTFALSEEVRPQDTVS

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.1

32.4

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

84.3

0.77

0.7

81.6

23.4

Minor 5ss

44.1

-0.6

2.9

63.8

41.6

Minor BPS

47.2

-0.2

63.56

42.2

Associated Gene:

Gene:

NPEPPS

Ensembl Gene ID:

ENSAPLG00000009750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010231

3428546 - 3455440

26895