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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3432009_3432592_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3432009 - 3432592

Intron Length:
584

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTAGGTTAT

5'SS Class:
major

3'SS Sequence:
TGCTCTCTCTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAG

U12 Branch Point Sequence:
TTCTGAGGGACT

Flanking Amino Acid:
QILSADLRSPVYVTILKHGD

Intron Amino Acid Position:
670

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.9
0.4
1.2
68.3
39.3

Major BPS
67.4
0.43
1.5
65.3
43.7

Major PPT
74.8
0.56
0.8
73.3
31.7

Minor 5ss
43.4
-0.7
3.2
67
44.2

Minor BPS
39.5
-0.7
2.6
64.79
45.7

Associated Gene:

Gene:
NPEPPS

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3428546 - 3455440
26895