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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3493826_3494191_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3493826 - 3494191

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGGC

5'SS Class:

major

3'SS Sequence:

CCGCGGCGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GTGTCCCCATCC

Flanking Amino Acid:

ERSLDPDDIREELKKLYAQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

58.7

40.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

52.9

0.07

45.1

36.5

Minor 5ss

25.8

-2.8

3.2

25.2

37.3

Minor BPS

46.1

-0.3

2.1

60.47

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046743

3491456 - 3496300

4845