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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3494566_3494709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3494566 - 3494709

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

CTGCCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

GTGCCCCCACGC

Flanking Amino Acid:

HDLGRLPRGQVRRGPLAAPR

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

75.3

0.57

0.8

65.5

36.1

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

37.4

-0.9

2.1

45.64

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032352

3491456 - 3496300

4845

ENSAPLT00000046743

3491456 - 3496300

4845