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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3495530_3495604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3495530 - 3495604

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CTGCACCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

TGGATCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

68.7

0.42

0.9

61.5

34.5

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

47.1

-0.2

1.8

56.34

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046743

3491456 - 3496300

4845