Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3506721_3507070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3506721 - 3507070

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCCCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACTAT

U12 Branch Point Sequence:

GGGTGACTATCT

Flanking Amino Acid:

GPAHQAGLRTGDRLVKVNGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

48.8

-0

1.4

46.8

46.3

Major PPT

74.9

0.56

0.7

68.2

25.3

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

38.5

-0.7

2.3

55.59

45.7

Associated Gene:

Gene:

ARHGAP23

Ensembl Gene ID:

ENSAPLG00000030055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025304

3505569 - 3517927

12359