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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3510396_3510697_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3510396 - 3510697

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGGGGATG

5'SS Class:

major

3'SS Sequence:

ACCCGGCCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

GCTCCTGCCACC

Flanking Amino Acid:

LSRHYSQDCSKRAPSLPRRD

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.1

63.2

42.9

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

54.2

0.1

43.7

Minor 5ss

30.7

-2.2

3.5

38.8

Minor BPS

38.5

-0.9

2.3

48.24

41.8

Associated Gene:

Gene:

ARHGAP23

Ensembl Gene ID:

ENSAPLG00000030055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025304

3505569 - 3517927

12359