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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3512933_3513491_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3512933 - 3513491

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAAGGGGT

5'SS Class:

major

3'SS Sequence:

GAGCAGCTCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

TTTCCCCCAGAT

Flanking Amino Acid:

QEGPDSGKLPKAPWGINLMK

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.4

69.5

38.5

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

55.2

0.12

42.9

42.7

Minor 5ss

22.8

-3.1

4.3

42.9

45.4

Minor BPS

45.8

-0.2

2.1

72.67

43.2

Associated Gene:

Gene:

ARHGAP23

Ensembl Gene ID:

ENSAPLG00000030055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025304

3505569 - 3517927

12359