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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3515141_3515237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3515141 - 3515237

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCCCCTGACCC

Flanking Amino Acid:

FSDKEDKGEKTPVDEKEAQS

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

82.9

0.74

0.8

76.8

31.7

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

47.4

-0.2

1.8

53.35

43.9

Associated Gene:

Gene:

ARHGAP23

Ensembl Gene ID:

ENSAPLG00000030055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025304

3505569 - 3517927

12359