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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3516697_3516804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3516697 - 3516804

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAA

U12 Branch Point Sequence:

TGTCCCTAAGCT

Flanking Amino Acid:

STHSGSAKVKGTWPSRKEPS

Intron Amino Acid Position:

1094

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

48.8

-0

1.3

46.6

38.3

Major PPT

74.2

0.54

0.8

36.3

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

57.2

0.31

78.57

43.2

Associated Gene:

Gene:

ARHGAP23

Ensembl Gene ID:

ENSAPLG00000030055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025304

3505569 - 3517927

12359