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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3528000_3530186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3528000 - 3530186

Intron Length:

2187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTATTTT

5'SS Class:

major

3'SS Sequence:

TCTGTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTCCCGAAATT

Flanking Amino Acid:

KPQLPLSSPQSGGVSIPAMK

Intron Amino Acid Position:

1532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.2

0.52

68.7

37.3

Minor 5ss

47.9

-0.2

2.6

67.6

43.4

Minor BPS

45.8

-0.2

2.3

64.41

46.6

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047926

3523646 - 3574318

50673

ENSAPLT00000030174

3523646 - 3574292

50647

ENSAPLT00000022275

3526825 - 3540839

14015

ENSAPLT00000021323

3523646 - 3595442

71797