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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3532734_3533079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3532734 - 3533079

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TCGTGTTTGACT

Flanking Amino Acid:

DEDRIIAELEVFQRSSASPF

Intron Amino Acid Position:

1074

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

75.2

0.57

0.9

66.2

40.4

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

58.9

0.36

1.8

74.14

43.6

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021574

3523646 - 3595442

71797

ENSAPLT00000021323

3523646 - 3595442

71797

ENSAPLT00000047926

3523646 - 3574318

50673

ENSAPLT00000030174

3523646 - 3574292

50647

ENSAPLT00000022275

3526825 - 3540839

14015