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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3537269_3537597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3537269 - 3537597

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TTGCCCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTTCCCTCAGCA

Flanking Amino Acid:

ATNGGTPPSASTSRSGMGTP

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

64.4

41.2

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

76.8

0.6

0.8

70.2

30.7

Minor 5ss

-1.7

3.3

44.4

43.5

Minor BPS

55.4

0.17

1.9

69.44

42.6

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021574

3523646 - 3595442

71797

ENSAPLT00000021323

3523646 - 3595442

71797

ENSAPLT00000047926

3523646 - 3574318

50673

ENSAPLT00000030174

3523646 - 3574292

50647

ENSAPLT00000022275

3526825 - 3540839

14015