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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3539039_3539439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3539039 - 3539439

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CCCCTTTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GTGTGACGACCC

Flanking Amino Acid:

ASHITNGDLRREMVYTSRES

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

65.4

40.4

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

76.4

0.59

0.7

71.5

26.5

Minor 5ss

29.1

-2.4

3.5

32.5

42.6

Minor BPS

34.6

-1.1

2.2

45.97

42.2

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022275

3526825 - 3540839

14015

ENSAPLT00000021574

3523646 - 3595442

71797

ENSAPLT00000021323

3523646 - 3595442

71797

ENSAPLT00000047926

3523646 - 3574318

50673

ENSAPLT00000030174

3523646 - 3574292

50647