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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3540262_3540376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3540262 - 3540376

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGCA

5'SS Class:

major

3'SS Sequence:

GCTCTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ACATCACCAACA

Flanking Amino Acid:

STSQTKLRSPGVLFLQFGDE

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.8

41.5

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

75.3

0.57

0.9

65.1

41.2

Minor 5ss

-1.8

3.7

47.9

47.7

Minor BPS

45.2

-0.3

2.1

57.47

41.1

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022275

3526825 - 3540839

14015

ENSAPLT00000021574

3523646 - 3595442

71797

ENSAPLT00000021323

3523646 - 3595442

71797

ENSAPLT00000047926

3523646 - 3574318

50673

ENSAPLT00000030174

3523646 - 3574292

50647