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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3550556_3564704_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3550556 - 3564704

Intron Length:

14149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GTTGTTTTATTT

Flanking Amino Acid:

RGQQERMRDQQPNYWSFKTR

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

79.6

0.67

0.9

81.5

35.9

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

0.2

1.7

71.36

40.7

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030174

3523646 - 3574292

50647

ENSAPLT00000021574

3523646 - 3595442

71797