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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3564989_3574116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3564989 - 3574116

Intron Length:

9128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGGAGT

5'SS Class:

major

3'SS Sequence:

TCTCCCCGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGGTCCTGACCC

Flanking Amino Acid:

GDCRLTPLLVDPDRTSTHMI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.5

46.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

70.4

0.46

0.9

65.1

30.5

Minor 5ss

32.5

-2

3.4

39.8

45.8

Minor BPS

51.7

0.03

1.8

61.03

43.7

Associated Gene:

Gene:

SRCIN1

Ensembl Gene ID:

ENSAPLG00000026819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030174

3523646 - 3574292

50647

ENSAPLT00000047926

3523646 - 3574318

50673