Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3679247_3679646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3679247 - 3679646

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGGGG

5'SS Class:

major

3'SS Sequence:

GTTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATGCTCTTATGT

Flanking Amino Acid:

IENSLSTSSEDPHSGCPSRS

Intron Amino Acid Position:

757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

52.2

44.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

78.4

0.64

0.8

70.1

36.5

Minor 5ss

26.9

-2.7

3.7

37.8

Minor BPS

0.01

1.9

67.1

43.8

Associated Gene:

Gene:

MLLT6

Ensembl Gene ID:

ENSAPLG00000008636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009037

3644611 - 3683965

39355