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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3692185_3692724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3692185 - 3692724

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGCA

5'SS Class:

major

3'SS Sequence:

TCCCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCCT

U12 Branch Point Sequence:

CTCTCCTGCCCC

Flanking Amino Acid:

DIAYIYPWRRNGPLPLKYRV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

40.2

Major BPS

32.7

-1

4.2

38.9

Major PPT

75.9

0.58

0.7

69.2

24.6

Minor 5ss

36.2

-1.6

3.3

39.6

45.9

Minor BPS

38.1

-0.9

3.6

58.45

46.5

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539