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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3692806_3692999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3692806 - 3692999

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGCG

5'SS Class:

major

3'SS Sequence:

GTCCTTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TGGCTCTGATGC

Flanking Amino Acid:

NKMDVPSKYKVEVLYEDEPL

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

56.7

42.7

Major BPS

0.72

38.9

Major PPT

74.3

0.55

68.4

42.1

Minor 5ss

29.8

-2.3

3.4

47.1

Minor BPS

42.3

-0.6

1.9

48.94

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539