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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3693099_3693273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3693099 - 3693273

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGTAC

U12 Branch Point Sequence:

CTCCCTTGTACC

Flanking Amino Acid:

IENGDLEKDKKNGVRFLRCP

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

49.7

-0

1.4

52.7

42.9

Major PPT

67.5

0.39

57.5

43.2

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

47.1

-0.2

1.8

56.51

42.1

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539