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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3693323_3693785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3693323 - 3693785

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCGCT

5'SS Class:

major

3'SS Sequence:

TCCTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CTTTCCTGCCCC

Flanking Amino Acid:

SLSIEFYEGTREEKKGSIEN

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

41.3

Major BPS

0.22

1.2

52.4

43.3

Major PPT

0.47

0.8

61.6

Minor 5ss

44.5

-0.6

3.3

65.7

45.4

Minor BPS

40.9

-0.7

3.6

66.78

44.8

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042401

3691852 - 3697390

5539

ENSAPLT00000042952

3690721 - 3697390

6670