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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3693895_3693978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3693895 - 3693978

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CGCGGCTCAGCC

Flanking Amino Acid:

DFYAAYPMAEVPNGSNEDRG

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

0.47

0.8

61.6

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

38.9

-0.8

2.1

42.68

44.5

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539