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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3694030_3694261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3694030 - 3694261

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

TTTCCCCCACCT

Flanking Amino Acid:

VYKLVPGLFKDEMKRRRDFY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.9

38.7

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

28.4

-2.5

3.6

38.8

46.4

Minor BPS

49.4

0.03

2.2

78.94

42.7

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539