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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3694318_3695914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3694318 - 3695914

Intron Length:

1597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TTTTCCTTTTCT

Flanking Amino Acid:

VHKTRPLLSIRSDKTLQDIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

0.81

0.7

77.8

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539