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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3696012_3696225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3696012 - 3696225

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GTTTGCTCAGGT

Flanking Amino Acid:

ATTIVECLHSFCKTCIVRYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

69.1

35.8

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

78.7

0.65

0.7

73.3

24.9

Minor 5ss

34.7

-1.7

3.4

53.4

43.8

Minor BPS

44.8

-0.3

2.4

68.99

47.4

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042952

3690721 - 3697390

6670

ENSAPLT00000042401

3691852 - 3697390

5539