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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3696367_3697017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3696367 - 3697017

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGGGG

5'SS Class:

major

3'SS Sequence:

GATTTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGGAT

U12 Branch Point Sequence:

GTTTTGGGGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

53.3

43.7

Major BPS

46.5

-0.2

1.6

42.8

49.4

Major PPT

77.8

0.62

0.9

70.7

35.8

Minor 5ss

34.8

-1.7

3.5

46.9

48.5

Minor BPS

39.7

-0.7

2.5

63.37

41.5

Associated Gene:

Gene:

PCGF2

Ensembl Gene ID:

ENSAPLG00000025818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042401

3691852 - 3697390

5539