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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3740033_3740384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3740033 - 3740384

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTGCTTTATA

Flanking Amino Acid:

PVKMKKIKELLQNSLDKKEK

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.8

34.8

Major BPS

76.9

0.67

66.3

40.4

Major PPT

85.6

0.8

0.7

80.6

31.5

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

62.3

0.38

2.1

79.05

37.5

Associated Gene:

Gene:

CWC25

Ensembl Gene ID:

ENSAPLG00000003710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003806

3736971 - 3741870

4900