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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3747162_3747229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3747162 - 3747229

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCGGCGGG

5'SS Class:

major

3'SS Sequence:

CGCTGTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

CCCGCGGTGACC

Flanking Amino Acid:

GREGPAAGGEGAAAVLLRYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.3

50.3

43.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

69.1

0.43

0.9

65.2

36.3

Minor 5ss

-3.6

3.9

20.1

37.8

Minor BPS

38.1

-0.9

2.5

44.28

44.8

Associated Gene:

Gene:

PSMC3IP

Ensembl Gene ID:

ENSAPLG00000017944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044507

3747122 - 3748895

1774